PySlyde
Contents:
Installation
Requirements
Installation from PyPI
Installation from Source
Development Installation
System Dependencies
Ubuntu/Debian:
macOS:
Windows:
Verifying Installation
Troubleshooting
Common Installation Issues
Getting Help
Quick Start Guide
Basic Usage
Loading a Slide
Working with Annotations
Generating Masks
Extracting Regions
Tiling and Feature Extraction
Creating Tiles
Extracting Features
Saving Results
Tissue Detection
Image Filtering
Complete Example
Next Steps
API Reference
Core Classes
Slide Module
Slide
Annotations
Slide Class
Annotations Class
I/O Modules
Utility Modules
Encoder Modules
PySlyde
Index
Index
_
|
A
|
C
|
D
|
E
|
F
|
G
|
K
|
M
|
N
|
P
|
R
|
S
|
V
_
__init__() (pyslyde.slide.Annotations method)
,
[1]
(pyslyde.slide.Slide method)
,
[1]
_border (pyslyde.slide.Slide attribute)
,
[1]
A
Annotations (class in pyslyde.slide)
,
[1]
annotations (pyslyde.slide.Annotations property)
,
[1]
(pyslyde.slide.Slide attribute)
C
class_key (pyslyde.slide.Annotations property)
,
[1]
D
detect_components() (pyslyde.slide.Slide method)
,
[1]
df() (pyslyde.slide.Annotations method)
,
[1]
dims (pyslyde.slide.Slide attribute)
,
[1]
,
[2]
draw_border (pyslyde.slide.Slide attribute)
,
[1]
E
encode_keys() (pyslyde.slide.Annotations method)
,
[1]
F
filter_labels() (pyslyde.slide.Annotations method)
,
[1]
G
generate_mask() (pyslyde.slide.Slide method)
,
[1]
generate_region() (pyslyde.slide.Slide method)
,
[1]
get_border() (pyslyde.slide.Slide method)
,
[1]
K
keys (pyslyde.slide.Annotations property)
,
[1]
M
mag (pyslyde.slide.Slide attribute)
,
[1]
,
[2]
MAG_FACTORS (pyslyde.slide.Slide attribute)
,
[1]
MASK_SIZE (pyslyde.slide.Slide attribute)
,
[1]
module
pyslyde.slide
N
name (pyslyde.slide.Slide attribute)
,
[1]
,
[2]
numbers (pyslyde.slide.Annotations property)
,
[1]
P
pyslyde.slide
module
R
rename_labels() (pyslyde.slide.Annotations method)
,
[1]
resize_border() (pyslyde.slide.Slide static method)
,
[1]
S
save() (pyslyde.slide.Annotations method)
,
[1]
(pyslyde.slide.Slide method)
,
[1]
Slide (class in pyslyde.slide)
,
[1]
slide_mask (pyslyde.slide.Slide property)
,
[1]
V
values (pyslyde.slide.Annotations property)
,
[1]